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  1. FHIR Specification Feedback
  2. FHIR-8085

2015May core #1467 - Make observed nucleotides differing from the reference UPPERCASE and the nucleotides which are the same as the reference lowercase

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    • Icon: Change Request Change Request
    • Resolution: Persuasive
    • Icon: Medium Medium
    • FHIR Core (FHIR)
    • DSTU1
    • Clinical Genomics
    • Observation
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      Make observed nucleotides differing from the reference UPPERCASE and the nucleotides which are the same as the reference lowercase

      Alignment issues should be expressed by CIGAR field alone. ObservedAllele and referenceAllele are now plain ATCG sequences

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      Make observed nucleotides differing from the reference UPPERCASE and the nucleotides which are the same as the reference lowercase Alignment issues should be expressed by CIGAR field alone. ObservedAllele and referenceAllele are now plain ATCG sequences
    • Gil Alterovitz/Grant Wood: 5-1-3
    • Clarification
    • Non-compatible
    • R5

    Description

      Comment:

      for CIGAR, recommend making observed nucleotides differing from the reference UPPERCASE and the nucleotides which are the same as the reference lowercase

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            Unassigned Unassigned
            mullman Mollie Ullman-Cullere
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              Created:
              Updated:
              Resolved: