Uploaded image for project: 'FHIR Specification Feedback'
  1. FHIR Specification Feedback
  2. FHIR-32008

mCODE structure cannot support common, essential, actionable clinical genomics use cases

    XMLWordPrintableJSON

Details

    • Icon: Change Request Change Request
    • Resolution: Persuasive
    • Icon: Medium Medium
    • US Minimal Common Oncology Data Elements (mCODE) (FHIR)
    • 1.16.0 [deprecated]
    • Clinical Interoperability Council
    • DNA Change Type Value Set [deprecated]
      Genomic Region Studied Profile
    • Hide

      This issue has been split into a number of other issues, and these will be considered separately as part of Block Vote 6.

      Show
      This issue has been split into a number of other issues, and these will be considered separately as part of Block Vote 6.
    • Saul Kravitz/Sherita Alai:4-0-0
    • Correction
    • Non-compatible
    • Yes

    Description

      1 mCODE CancerGeneticVariant missing genomic variant category Change request 1.16.0  
      2 mCODE does not have an adequate way to support fusion events Change request 1.16.0 multiple Genomics reports designate fusion events. Creating two gene-studied components in CancerGeneticVariant does not adequately represent the fusion type or asserts that it is a fusion event.
      3 mCODE CancerGeneticVariant missing clinical significance Change request 1.16.0  
      4 mCODE CancerGeneticVariant missing allelic frequency Change request 1.16.0  
      5 mCODE CancerGeneticVariant missing Genomic Structural Variant Copy Number Change request 1.16.0  
      6 Consider renaming CancerGeneticVariant to a more accurate name which covers both dna and amino acid changes Change request
           

      Attachments

        Activity

          People

            Unassigned Unassigned
            jimchen_jira James L. Chen (Inactive)
            Watchers:
            3 Start watching this issue

            Dates

              Created:
              Updated:
              Resolved: