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  1. FHIR Specification Feedback
  2. FHIR-13829

new searchable parameter: variant-start

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    • Icon: Change Request Change Request
    • Resolution: Persuasive with Modification
    • Icon: Medium Medium
    • FHIR Core (FHIR)
    • Clinical Genomics
    • MolecularSequence (was Sequence)
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      Persuasive with Mod

      Clean up text in current 'coordinate' search param.

      Rename 'coordinate' -> 'chromosome-coordinate'

      Create new search param:

      'reference-coordinate':

      Expression for the new search param: Sequence.reference.referenceSeqId + Sequence.variant.start + Sequence.variant.end

      Do NOT add search param for structural variant start/end

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      Persuasive with Mod Clean up text in current 'coordinate' search param. Rename 'coordinate' -> 'chromosome-coordinate' Create new search param: 'reference-coordinate': Expression for the new search param: Sequence.reference.referenceSeqId + Sequence.variant.start + Sequence.variant.end Do NOT add search param for structural variant start/end
    • James J / Patrick W: 10-0-1
    • Enhancement
    • Non-compatible
    • R5

    Description

      Add new search parameters at resource sequence:

      variant-start,

      variant-end,

      struc-var-outer-start,

      struc-var-outer-end,

      struc-var-inner-start,

      struc-var-inner-end

      http://genomics-advisor.smartplatforms.org:4000/sequence.html#search

      Reason: it'll be more convinient for searching through Fhir server

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            Unassigned Unassigned
            xliu3 Xin Liu
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              Created:
              Updated:
              Resolved: